HORDB

ID: hor004658
Uniprot ID: Q8S8N3(27-81)
Protein name: CLAVATA3/ESR (CLE)-related protein 6
Gene name: CLE6
Organism: Arabidopsis thaliana (Mouse-ear cress)
Family: CLV3/ESR signal peptide family
Source: Plant
Expression: [CLE6p]: Mostly expressed in roots, seedlings, stems and flowers, and, to a lower extent, in apex and siliques.
Disease: NA
Comments: NA
Taxonomy: Arabidopsis (genus), Camelineae (tribe), Brassicaceae (family), Brassicales (order), malvids, rosids, Pentapetalae, Gunneridae, eudicotyledons, Mesangiospermae, Magnoliopsida (class), Spermatophyta, Euphyllophyta, Tracheophyta, Embryophyta, Streptophytina (subphylum), Streptophyta (phylum), Viridiplantae (kingdom), Eukaryota (superkingdom), cellular organisms
GO MF: NA
GO BP: GO:0030154 cell differentiation; GO:0045168 cell-cell signaling involved in cell fate commitment; GO:2000023 regulation of lateral root development; GO:2000067 regulation of root morphogenesis
GO CC: GO:0005576 extracellular region; GO:0048046 apoplast

Sequence: RILRTYRPTTMGDMDSQVLLRELGIDLSKFKGQDERRFLVDSERVSPGGPDPQHH
Length: 55(27-81)
Propeptide: MANLILKQSLIILLIIYSTPILSSQARILRTYRPTTMGDMDSQVLLRELGIDLSKFKGQDERRFLVDSERVSPGGPDPQHH
Signal peptide: MANLILKQSLIILLIIYSTPILSSQA
Modification: T47 Hydroxyproline;T50 Hydroxyproline
Glycosylation: T50 O-linked (Ara...) hydroxyproline
Mutagenesis: NA

Structure: (PDB_ID-from https://www.rcsb.org/; AlphaFold_DB_ID-from https://alphafold.ebi.ac.uk/; hordbxxxxxx_AF2.pdb was predicted structure by AlphaFold2; hordbxxxxxx_ESM.pdb was predicted structure by ESMFold)

hor004658_AF2.pdb

hor004658_ESM.pdb

Mass:	731553	Formula:	C274H443N85O85S2
Absent amino acids:	ACNW	Common amino acids:	RDL
pI:	7.71	Basic residues:	11
Polar residues:	13	Hydrophobic residues:	13
Hydrophobicity:	-88.91	Boman Index:	-16884
Half-Life:	1 hour	Half-Life Yeast:	2 min
Half-Life E.Coli:	2 min	Aliphatic Index	72.55
Instability Index:	5111.45	Extinction Coefficient cystines:	1490
Absorbance 280nm:	27.59